Bioengineering Hyperbook

Department of Bioengineering


Just Keep Swimming: Structure, Movement, and Light Interactions of Unicellular Green Algae

Unicellular green algae, stress, locomotion, kinematics, swimming, light properties

Ai-Lan Ji-Eun Nguyen, Tesnim Obey, Anders Schwarz, Jackson Yu

Unveiling the Chemistry of Radiolaria: Exploring Elemental Insights and Environmental Significance

Biomineralization, bioluminescence, photosymbiosis, silica cycle, bioindicator, protists

Vicky Barré, Rhiannon Butler, Valerie Hung, Liora Benzecry

The Physics of Foraminifera

Environmental pressure, reproductive strategy, vertical migration, strength rigidity and elasticity, pseudopodia, tests or shell geometry, openings

Carolyn Denton, Emma Bussiéres, Rachel Jiang, Reno Thompson

Phenotypic Adaptation of Daphnia Throughout Evolution

Compound eye, swimming, adaptation, defense mechanisms, Stokes' law

Eva Otell, Iris Sun, Marwan Sobh, Rémi Ouellette, Xinying Wang

Shaping Success: A Mathematical Exploration of Cyanobacteria across Scales

Allometric power functions, bacterial growth, geometrical models, persistence length, semi-flexible, colony, polyhedral

Max Bai, Sierra Bushey, Maria Delgopiatof, Valerie Syme

Exploring the Mathematics of Unicellular Green Algae (Chlamydomonas Reinhardtii)

Unicellular green algae, synchronization, fluid dynamics, optimization, population dynamics, growth modeling

Ai-Lan Ji-Eun Nguyen, Tesnim Obey, Anders Schwarz, Jackson Yu

Copepods Through the Lens of Math

Low-Reynolds, swimming, diel vertical migration, reflectance, molting, coloration, crustacean

Johanna Turton, Melodi Rousset, Philippe Mercier, Tanjin Sultana

Copepods Through the Lens of Physics

Mechanoreception, low reynolds, clap and fling or Weis-Fog, fluid mechanics, Wagner effect, coloration

Johanna Turton, Melodi Rousset, Philippe Mercier, Tanjin Sultana

Mechanics and Optics of Cyanobacteria: How to Survive over Billions of Years

Survival mechanisms, photosynthesis, buoyancy regulation, light-sensing or phototaxis, bacteria, gliding motility, biofilm

Maria Delgopiatof, Max Bai, Sierra Bushey, Valerie Syme

Discussion of Nature’s Design Solutions in Tintinnids: Masters of Microzooplankton Survival

Tintinnids, plankton, geometry, buoyancy, swimming, aquatic ecosystems

Alexa Bailey, Lou Cubberly, Margaux-Blondin Routhier, Niall Slack-Watkins

The Physics of Coral Polyps

Coral polyps, hydrodynamics, sensing, feeding, anisotropy, photoreceptors

Michael Beyrouthy, Cris Izzi, Claudio Petroni, Alex Tsiskakis

A Physical Analysis of Magnetotactic Bacteria: Nature’s Microscopic Compass as a Solution to a Motile Biotope

Magnetotactic bacteria, phototaxis, aerotaxis, sensing, fluid dynamics, swimming

Alex Gagnon, Catriona Kirk, Jason Li, Sofian Martinais

Physical Principles Governing the Movement of Dinoflagellates and The Implications for Their Interactions in Aquatic Ecosystems

Dinoflagellates, flagella, swimming, kinematics, Reynolds number, fluid dynamics

Thalia Azadian, Arda Barlas, Sophia Chen, Simon Girard

Mathematical Models of Diatoms: Understanding Their Complex Shape, Reproduction and Chain Formation

Diatoms, geometry, Gielis formula, structural functionality, fractals

Peter Matthews-Crochetiere, Daniel Ibrahim, Wenan Liao, Cedric Mackay

Life-Sustaining Processes of the Diatom

Diatoms, life cycles, biomineralization, reproduction, reactive oxygen species, biochemistry

Peter Matthews-Crochetiere, Daniel Ibrahim, Wenan Liao, Cedric Mackay

Frustules: Design solutions in Diatoms

Diatoms, frustules, elasticity, light properties, buoyancy

Peter Matthews-Crochetiere, Daniel Ibrahim, Wenan Liao, Cedric Mackay

The Mathematical Principles Pertaining to Coccolithophores

Coccolithophores, geometry, 3D modeling, vestigial haptonema, growth modeling

Megan Farrow, Zackary Murphy, Minh Tri Pham, Jia Yi Yu

Aquatic Fungi: An Exploration of Adaptations in Chemical Processes

Aquatic fungi, hyphae, chemotaxis, pheromones, decomposition, biochemistry, bioremediation

Izabela Junqueira Magalhaes, Kristina Kerkelova, Ruizhi Liu, Yasmine Sadr Kaufmann

Physical Analysis of Amoeba

Movement and migration, hydrodynamics, motor proteins, galvanotaxis, fluid mechanics, amoeba

Hailey Jukes, Adele Omichinski, Nicholas Da-Costa-Bastidas, Gil Qin

Functional Mechanics of the Elephant and Butterfly Proboscis

Trunk, proboscis, kinematics, cylinders, hydraulics, muscles, suction

Han Ru Liu, Letizia Marello, Liam Sterne, Kori Zhang