Bioengineering Hyperbook

Department of Bioengineering


The Biochemical Nature of Cyanobacteria

Nitrogen fixation, oxidative stress, bacteria, homeostasis, DNA repair, defense mechanism, carbon dioxide capture

Max Bai, Sierra Bushey, Maria Delgopiatof, Valerie Syme

Copepods Through the Lens of Chemistry

Pigmentation, symbiotic, chemoreception, bioluminescence, crustacean, toxin

Johanna Turton, Melodi Rousset, Philippe Mercier, Tanjin Sultana

The Physical Adaptations Underlying the Tardigrade’s Resistance to Extreme Environmental Conditions 

Tardigrades, microorganism anatomy, mechanical strength, protein function, thermoresistance

Luccia Jabbour, Eden Karp-Foster, Jeremy Lachance, Wadi Zahka

Coral Polyps and the Chemical Symphony of Survival

Coral polyps, biomineralization, crystals, calcification, symbiotic relationships, cellular respiration, coral bleaching

Michael Beyrouthy, Cris Izzi, Claudio Petroni, Alex Tsiskakis

The Metabolism and Movement of Dinoflagellate from a Chemical Perspective

Dinoflagellates, toxins, photosynthesis, bioluminescence, sensing, metabolism

Thalia Azadian, Arda Barlas, Sophia Chen, Simon Girard

Mathematical Analysis of Amoebas

Motility, crystal, optimization, maze-solving, swarm, oxidation

Hailey Jukes, Adele Omichinski, Nicholas Da-Costa-Bastidas, Gil Qin

Exploring the Mathematics of Unicellular Green Algae (Chlamydomonas Reinhardtii)

Unicellular green algae, synchronization, fluid dynamics, optimization, population dynamics, growth modeling

Ai-Lan Ji-Eun Nguyen, Tesnim Obey, Anders Schwarz, Jackson Yu

Copepods Through the Lens of Math

Low-Reynolds, swimming, diel vertical migration, reflectance, molting, coloration, crustacean

Johanna Turton, Melodi Rousset, Philippe Mercier, Tanjin Sultana

Copepods Through the Lens of Physics

Mechanoreception, low reynolds, clap and fling or Weis-Fog, fluid mechanics, Wagner effect, coloration

Johanna Turton, Melodi Rousset, Philippe Mercier, Tanjin Sultana

Mechanics and Optics of Cyanobacteria: How to Survive over Billions of Years

Survival mechanisms, photosynthesis, buoyancy regulation, light-sensing or phototaxis, bacteria, gliding motility, biofilm

Maria Delgopiatof, Max Bai, Sierra Bushey, Valerie Syme

The Chemistry of Unicellular Green Algae (Chlamydomonas reinhardtii)

Unicellular green algae, photosynthesis, Cellular respiration, biofuel, signaling, flagella

Ai-Lan Ji-Eun Nguyen, Tesnim Obey, Anders Schwarz, Jackson Yu

Microscopic Mathematics; Tintinnid’s Strategic Survival

Tintinnids, population dynamics, swimming, helices, geometry

Alexa Bailey, Lou Cubberly, Margaux-Blondin Routhier, Niall Slack-Watkins

Underwater Chemists: Discussion of Design Solutions in Tintinnid Ciliates

Tintinnids, digestion, reproduction, navigation, bioindicators, biochemical pathways

Alexa Bailey, Lou Cubberly, Margaux-Blondin Routhier, Niall Slack-Watkins

Discussion of Nature’s Design Solutions in Tintinnids: Masters of Microzooplankton Survival

Tintinnids, plankton, geometry, buoyancy, swimming, aquatic ecosystems

Alexa Bailey, Lou Cubberly, Margaux-Blondin Routhier, Niall Slack-Watkins

The Mathematics of Tardigrade Behavior and Development

Tardigrades, 3D modeling, feeding, optimization, allometry, trophic networks

Luccia Jabbour, Eden Karp-Foster, Jeremy Lachance, Wadi Zahka

The Biochemical Features of Tardigrades and Their Roles in Maintaining Cellular Functional Integrity

Tardigrades, cryptobiosis, reactive oxygen species, DNA repair mechanisms, biochemistry, antioxidants

Luccia Jabbour, Eden Karp-Foster, Jeremy Lachance, Wadi Zahka

Mathematical Marine Models of Coral Polyps

Coral polyps, geometry, branching, environmental modeling, fractals, hyperbolic geometry

Michael Beyrouthy, Cris Izzi, Claudio Petroni, Alex Tsiskakis

The Physics of Coral Polyps

Coral polyps, hydrodynamics, sensing, feeding, anisotropy, photoreceptors

Michael Beyrouthy, Cris Izzi, Claudio Petroni, Alex Tsiskakis

Magnetic Marvels: A Mathematical Exploration of Magnetotactic Bacteria

Magnetotactic bacteria, crystals, symmetry, geometry, statistical mechanics, chemotaxis

Alex Gagnon, Catriona Kirk, Jason Li, Sofian Martinais

Nature’s Nanomagnets: A Chemical Perspective on Magnetotactic Bacteria

Magnetotactic bacteria, biomineralization, polarity, biochemical pathways, horizontal gene transfer, sensing

Alex Gagnon, Catriona Kirk, Jason Li, Sofian Martinais