Bioengineering Hyperbook

Department of Bioengineering


Category: Cytoskeleton

Physarum Polycephalum (Slime Mold): the Mazerunner 

Physarum polycephalum; Slime mold; Tube network; Locomotion; External stimuli; Navigation; Structural integrity; Peristaltic waves; Chemotaxis; Lattice structure

Audrey Pepin, Ethan Levene, Olivia Cozariuc, Tamir Kegeles

Navigating the Depths of Hydrozoan and Bryozoan Physical Design Solutions  

Skeletons, Locomotion, Medusoid jet propulsion, Hydrodynamics, Feeding mechanisms, Nematocytes

Aizaz Ahsan Wahla, Ocean Burland, Dante Daniel Garcia Perez, Jessica Michalski

The Fungal Kingdom: Mechanisms of Adaptation and Interaction with the Physical World 

Symbiosis, Turgor Pressure, Fungi, Growth, Cell Structure, Morphology, Spores

Edison Luke, Felix Gamper, Lea Bleibel, Vasily Ignatov

The Physical Basis of Coral Reefs 

Maureen Awad, Evan Chow, Luke Gailloux, Rylee McKay, Adrian Yehia

The Chemistry Lying Deep Within a Volvox Colony

Asexual/sexual reproduction, metabolism, protein-protein interactions, phototsynesis, colony, aging/senescence

Robinson Libman, Meryem Louni, Ryan McGibbon, Ali Najjar

A Mathematical Analysis of Hydra

Turing pattern, regeneration, microbial symbiosis or holobiont, feedback, topology and toplogical defects

Jessica Coulson, Magnus Duffy, Ruolin Hu, Shilong Zheng

An Investigation of the Physical Properties of Gonium

Flagellar motion, phototaxis, colonies, eyespot optics, helical propulsion, protist

Andrew D’Argenio, Breanna D’Ettorre, Lucas Elliott, Joseph Gad

The Chemistry of Unicellular Green Algae (Chlamydomonas reinhardtii)

Unicellular green algae, photosynthesis, Cellular respiration, biofuel, signaling, flagella

Ai-Lan Ji-Eun Nguyen, Tesnim Obey, Anders Schwarz, Jackson Yu

A Physical Analysis of Magnetotactic Bacteria: Nature’s Microscopic Compass as a Solution to a Motile Biotope

Magnetotactic bacteria, phototaxis, aerotaxis, sensing, fluid dynamics, swimming

Alex Gagnon, Catriona Kirk, Jason Li, Sofian Martinais

Physical Principles Governing the Movement of Dinoflagellates and The Implications for Their Interactions in Aquatic Ecosystems

Dinoflagellates, flagella, swimming, kinematics, Reynolds number, fluid dynamics

Thalia Azadian, Arda Barlas, Sophia Chen, Simon Girard

Mathematical Models of Diatoms: Understanding Their Complex Shape, Reproduction and Chain Formation

Diatoms, geometry, Gielis formula, structural functionality, fractals

Peter Matthews-Crochetiere, Daniel Ibrahim, Wenan Liao, Cedric Mackay

An Analysis of the Chemistry Behind Coccolithophores

Coccolithophores, calcification, crystallization, photosynthesis, biochemical pathways, ocean acidification

Megan Farrow, Zackary Murphy, Minh Tri Pham, Jia Yi Yu